tomwer sa-axis#
Purpose#
The tomwer sa-axis command provides an interface to reconstruct a slice over a range of centers of rotation and compute a score for each to determine the best center of rotation.
Usage#
tomwer sa-axis [-h] [--entry ENTRY] [--debug] [--read-existing] [--dump-roi] scan_path
Options#
scan_path For EDF acquisition: provide the folder path. For HDF5/Nexus: provide the master file.
entry For Nexus files: entry in the master file.
read-existing Load the latest sa-delta-beta processing from *_tomwer_processes.h5 if it exists.
debug Activate debug logs.
dump-roi Save the region of interest (ROI) where the score is computed to the .hdf5 file (for debugging purposes).
-h, --help Show this help message and exit.
Examples of Usage#
tomwer sa-axis nexus_file.nx --entry entry0000