tomoscan.esrf.scan.framereducer.edfframereducer.EDFFrameReducer#

class tomoscan.esrf.scan.framereducer.edfframereducer.EDFFrameReducer(scan, reduced_method, target, output_dtype, input_flat_pattern='ref*.*[0-9]{3,4}_[0-9]{3,4}', input_dark_pattern='darkend[0-9]{3,4}', flat_output_prefix='refHST', dark_output_prefix='dark.edf', overwrite=False, file_ext='.edf')#

Bases: FrameReducerBase

__init__(scan, reduced_method, target, output_dtype, input_flat_pattern='ref*.*[0-9]{3,4}_[0-9]{3,4}', input_dark_pattern='darkend[0-9]{3,4}', flat_output_prefix='refHST', dark_output_prefix='dark.edf', overwrite=False, file_ext='.edf')#

Methods

`__init__`(scan, reduced_method, target, ...)
`getDARK_N`(scan)
`getTomo_N`(scan)
`get_closest_SR_current`(scan_dir[, refFile])	Parse files contained in the given directory to get information about the incoming energy for the serie iSerie
`get_closest_count_time`(scan_dir[, refFile])
`get_info`(keyword)
`get_n_digits`(_file, directory)
`get_originals`()	compute the list of originals files to be used to compute the reducer target.
`get_series_value`(fileNames, file_ext)
`group_files_per_serie`(files, series)
`preprocess`()
`preprocess_PCOTomo`()
`remove_raw_files`()	Remove orignals files fitting the target (dark or flat files)
`run`()	rtype `dict`

Attributes

`DARKHST_PREFIX`
`RAW_DARK_RE`	regular expression to discover raw dark files
`RAW_FLAT_RE`	regular expression to discover flat files
`REFHST_PREFIX`
`input_dark_pattern`
`input_flat_pattern`
`output_dtype`
`overwrite`
`reduced_method`	rtype `ReduceMethod`
`reducer_target`	rtype `REDUCER_TARGET`
`scan`	rtype `TomoScanBase`

RAW_DARK_RE = 'darkend[0-9]{3,4}'#: regular expression to discover raw dark files

RAW_FLAT_RE = 'ref*.*[0-9]{3,4}_[0-9]{3,4}'#: regular expression to discover flat files

static get_closest_SR_current(scan_dir, refFile=None)#

Parse files contained in the given directory to get information about the incoming energy for the serie iSerie

Parameters

scan_dir – directory containing the acquisition
refFile – the refXXXX_YYYY which should contain information about the energy.

Returns

the energy in keV or none if no energy found

get_originals()#

compute the list of originals files to be used to compute the reducer target.

Return type: list

remove_raw_files()#: Remove orignals files fitting the target (dark or flat files)